彭司華

彭司華

彭司華，男，1962年出生於湖南保靖縣，博士，副研究員。先後畢業於東南大學，東北電力大學，浙江大學，分別獲工學學士，碩士，博士學位。先後在浙江大學機械與能源工程學院，醫學院病理學系任講師，美國史丹福大學（Stanford University）醫學院外科系任訪問副教授，美國韋恩州立大學 (Wayne State University)醫學院分子醫學與遺傳學中心任Research Associate，現為上海海洋大學水產與生命學院生物科學系教師。先後任10餘個SCI期刊審稿專家，現任3個生物信息學國際期刊編委。從事生物信息學，基因組學，機器學習研究工作，發表相關學術論文30餘篇，Google Scholar 總引用700餘次，單篇最高它引200餘次，H指數為13.

基本介紹

  • 中文名：彭司華
  • 國籍：中國
  • 職業：上海海洋大學生物科學系副研究員
  • 畢業院校：浙江大學信息學院
研究方向,教學工作情況,學術兼職,科研項目,代表論文,

研究方向

基因組學，二代測序數據分析，基於雲計算的基因組大數據分析, 深度學習（Deep learning） 在基因組學中的套用。

教學工作情況

《生物統計原理與套用》，本科生課程
《Biostatistics》，碩士研究生（留學生）英文課程

學術兼職

EURASIP Journal on Bioinformatics and Systems Biology(Springer) 編委
Informatics in Medicine Unlocked(Elsevier) 編委
Computational Molecular Bioscience(Scientific Research Publishing) 編委

科研項目

[1]上海海洋大學博士科研啟動項目，二代測序數據分析軟體集成系統開發, 在研, 主持。
[2]上海市科委自然科學基金面上項目,15ZR1420800, 高原鰍適應性分子進化研究, 2015/01-2017/12,在研, 主持。
[3]國家科技部“十一五”支撐計畫項目子項目, 2009BA180B0, 代謝綜合徵早期識別與干預技術研究, 2009/1-2012/12，已結題, 主持。
[4]浙江省科技計畫項目, 2012R10050-09，代謝綜合徵資料庫和標本庫建設，2012.1-2014.12，已結題, 主持。
[5]浙江省自然科學基金項目,Y2090081, 肥胖相關基因網路的構建及易感基因的篩查、2010/1-2011/12, 已結題, 主持。

代表論文

  1. Xu QH, Zhang C, Zhang DS, Jiang HP, Peng SH, Liu Y, Zhao K, Wang CC, Chen LB: Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments. BMC Evol Biol. 2016, 16.
  2. Xu QH, Cai C, Hu XX, Liu Y, Guo YN, Hu P, Chen ZZ, Peng SH, Zhang DS, Jiang SW et al: Evolutionary suppression of erythropoiesis via the modulation of TGF-beta signalling in an Antarctic icefish. Mol Ecol. 2015, 24(18):4664-4678
  3. Sylvester KG, Ling XB, Liu GY-G, Kastenberg ZJ, Ji J, Hu Z, Wu S, Peng SH, Abdullah F, Brandt ML, Ehrenkranz RA, Harris MC, Lee TC, Simpson BJ, Bowers C, Moss RL.Urine protein biomarkers for the diagnosis and prognosis of necrotizing enterocolitis in infants. Journal of Pediatrics. 2014, 164:607
  4. Sylvester KG, Ling XB, Liu GY, Kastenberg ZJ, Ji J, Hu Z, Peng SH, Lau K, Abdullah F, Brandt ML, Ehrenkranz RA, Harris MC, Lee TC, Simpson J, Bowers C, Moss RL. A novel urine peptide biomarker-based algorithm for the prognosis of necrotising enterocolitis in human infants. Gut. 2014, 63:1284-1292
  5. Peng SH, Zhu Y, Lu B, Xu F, Li X, Lai M. TCF7L2 gene polymorphisms and type 2 diabetes risk: A comprehensive and updated meta-analysis involving 121 174 subjects.Mutagenesis. 2013, 28:25-37
  6. Ling XB, Kanegaye JT, Ji J, Peng SH, Sato Y, Tremoulet A, Burns JC, Cohen HJ. Point-of-care differentiation of kawasaki disease from other febrile illnesses. Journal of Pediatrics. 2013, 162:183-U219
  7. Li X,Peng SH. Identification of metastasis-associated genes in colorectal cancer through an integrated genomic and transcriptomic analysis.Chinese Journal of Cancer Research. 2013, 25:623-636
  8. Ling XB, Macaubas C, Alexander HC, Wen Q, Chen E, Peng SH, Sun Y, Deshpande C, Pan K-H, Lin R, Lih C-J, Chang S-YP, Lee T, Sandborg C, Begovich AB, Cohen SN, Mellins ED. Correlation analyses of clinical and molecular findings identify candidate biological pathways in systemic juvenile idiopathic arthritis. BMC Medicine. 2012, 10
  9. Li X, Peng SH, Chen J, Lu B, Zhang H, Lai M. Svm-t-rfe: A novel gene selection algorithm for identifying metastasis-related genes in colorectal cancer using gene expression profiles. Biochemical and Biophysical Research Communications. 2012, 419:148-153
  10. Peng SH, Zhu Y, Xu F, Ren X, Li X, Lai M. FTO gene polymorphisms and obesity risk: A meta-analysis. BMC Medicine. 2011, 9
  11. Peng SH, Lue B, Ruan W, Zhu Y, Sheng H, Lai M. Genetic polymorphisms and breast cancer risk: Evidence from meta-analyses, pooled analyses, and genome-wide association studies. Breast Cancer Research and Treatment. 2011, 127:309-324
  12. Ling XB, Lau K, Kanegaye JT, Pan Z, Peng SH, Ji J, Liu G, Sato Y, Yu TTS, Whitin JC, Schilling J, Burns JC, Cohen HJ. A diagnostic algorithm combining clinical and molecular data distinguishes kawasaki disease from other febrile illnesses. BMC Medicine. 2011, 9
  13. Li X, Chen J, Lue B,Peng SH, Desper R, Lai M. -8p12-23 and +20q are predictors of subtypes and metastatic pathways in colorectal cancer: Construction of tree models using comparative genomic hybridization data. Omics-a Journal of Integrative Biology. 2011, 15:37-47
  14. Peng X, Zeng X, Peng SH, Deng D, Zhang J. The association risk of male subfertility and testicular cancer: A systematic review. Plos One. 2009, 4
  15. Peng SH, Zeng X, Li X, Peng X, Chen L. Multi-class cancer classification through gene expression profiles: Microrna versus mrna. Journal of Genetics and Genomics. 2009, 36:409-416
  16. Peng SH, Liu X, Yu J, Peng X, Chen L. A gene selection software package for cancer classification. IEEE Press, 2009.
  17. Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng SH, Chen L. Characterization of micrornas in cephalochordates reveals a correlation between microrna repertoire homology and morphological similarity in chordate evolution. Evolution & Development. 2009, 11:41-49
  18. Dong H, Deng Y, Chen J, Wang S,Peng SH, Dai Ce, Fang Y, Shao J, Lou Y, Li D. An exploration of 3 '-end processing signals and their tissue distribution in oryza sativa.Gene. 2007, 389:107-113
  19. Liu JJ, Cutler G, Li WX, Pan Z, Peng SH, Hoey T, Chen LB, Ling XFB. Multiclass cancer classification and biomarker discovery using ga-based algorithms. Bioinformatics. 2005, 21:2691-2697
  20. Peng SH, Xu QH, Ling XB, Peng XN, Du W, Chen LB. Molecular classification of cancer types from microarray data using the combination of genetic algorithms and support vector machines. Febs Letters. 2003, 555:358-362

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