基本介紹
- 中文名：古槿
- 畢業院校：清華大學
- 學位/學歷：博士
- 職業：教師
- 職稱：副教授
- 任職院校：清華大學
個人簡介,教育背景,學術兼職,研究領域,學術成果,
個人簡介
清華大學自動化系副教授
生物信息學教育部重點實驗室
清華信息國家實驗室生物信息學研究部
教育背景
清華大學自動化系，自動化，工學學士，2004年
學術兼職
中國人工智慧學會生物信息學與人工生命專委會常務委員
中國自動化學會青年工作委員會委員
BMC Medical Genomics, Associate Editor
研究領域
微小RNA（microRNA）及其調控網路
複雜生物網路的信息理論與計算分析
計算平台與資料庫開發
學術成果
工具軟體與資料庫
[1] ClustEx: responsive gene module identification package (v0.3)
[2] PCS: de novo k-mer analysis package (v1.5)
[3] Mamm miR-EST: the ESTs mapped to the flanking sequences of miRNAs
期刊論文
[1] Jin Gu, Yang Chen, Shao Li, Yanda Li. Identification of responsive gene modules by network-based gene clustering and extending: application to inflammation and angiogenesis. BMC Systems Biology 2010, 4:47.
[2] Jin Gu. Brief review: frontiers in the computational studies of gene regulations. Frontier of Electrical Electronic Engineering in China 2008, 3(3):251-259.
[3] Xiaowo Wang, Jin Gu, Michael Zhang, Yanda Li. Identification of phylogenetically conserved microRNA cis-regulatory elements across 12 Drosophila species. Bioinformatics 2008, 24(2):165-171.
[4] Tao He, Fei Li, Jin Gu, Ruiqiang Li, Fei Li. Computational Identification of 99 Invertebrate MicroRNAs with Comparative Genomics. Tsinghua Science and Technology 2008, 13(4):425-432.
[5] Jin Gu, Hu Fu, Xuegong Zhang, Yanda Li. Identifications of conserved 7-mers in 3'-UTRs and microRNAs in Drosophila. BMC Bioinformatics 2007, 8:32.
[6] Jin Gu, Tao He, Yunfei Pei, Fei Li, Jing Zhang, Xiaowo Wang, Xuegong Zhang, Yanda Li. Primary Transcripts and Expressions of Mammal Intergenic MicroRNAs Detected by Mapping ESTs to Their Flanking Sequences. Mammalian Genome 2006, 17(10):1033-1041.
[7] Xiaowo Wang, Jing Zhang, Fei Li, Jin Gu, Tao He, Xuegong Zhang, Yanda Li. MicroRNA Identification Based on Sequence and Structure Alignment. Bioinformatics 2005, 21(18):3610-3614.
會議論文與摘要
[1] Dingming Wu, Michael Q Zhang, Jin Gu. A new gene network clustering algorithm based on minimum spanning tree. The 4th Chinese National Bioinformatics and Systems Biology Conference, 2010, Hangzhou. (Poster)
[2] Ting Wang, Jin Gu, Rui Li, Shiwen Zhao, Yanda Li. Defining gene expression adaptive responses regulated by microRNAs and transcription factors in human umbilical vein endothelial cells. Computational Biology 2010, Suzhou Dushu Lake Conference Center. (Abstract & Oral Presentation)
[3] Jin Gu. A multiple-instance scoring method to predict tissue-specific cis-regulatory motifs and regions. The International MultiConference of Engineers and Computer Scientists (IMECS'10) 2010, Vol I:186-190. (Oral Presentation)
[4] Jin Gu, Shao Li, Yang Chen, Yanda Li. Integrative computational identifications of the signaling pathway network related to TNF-alpha stimulus in vascular endothelial cells. International Joint Conference on Bioinformatics, Systems Biology and Intelligent Computing (IJCBS'09) 2009, 422-427. (Oral Presentation)
