博士生導師。2012年獲得中國科學院生物信息學博士學位，2015年從美國加州大學河濱分校訪學回國，受聘為福建農林大學林學中心全職教授。第十四屆林業青年科技獎獲得者。2016年入選福建省C類引進高層次人才，2017年獲福建農林大學“金山學者”榮譽稱號。以福建農林大學為依託單位主持2015年國家自然科學基金面上項目“自毒脅迫下杉木可變剪接與microRNA相互調控網路研究”，承擔2016年國家重點專項“林木次生生長的分子調控和環境脅迫機制”子課題。承擔2018年“十三五”國家重點研發計畫專項“竹資源高效培育關鍵技術研究”項目“筍-竹生長發育機制與生長性狀評價”研究的子課題。在PNAS、Cell Research、Nature genetics等權威期刊上發表相關文章。主要從事生物信息學和林木遺傳改良相關研究。
基本介紹
- 中文名：顧連峰
- 畢業院校：中國科學院
- 學位/學歷：博士
- 專業方向：生物信息學
- 學術代表作：Genome biology
- 主要成就：福建省C類引進高層次人才
- 獲獎：第十四屆林業青年科技獎獲得者
- 職稱：教授
人物簡介,發表論文,人物獲獎,
人物簡介
顧連峰現為林學中心全職教授，博士生導師。2012年獲得中國科學院生物信息學博士學位，2015年從美國加州大學河濱分校回國，2016年入選福建省C類引進高層次人才，2017年獲第十四屆林業青年科技獎獲得者。現為福建農林大學“金山學者”。先後主持多項林學基金項目，包括國家自然基金面上項目兩項、重點研發子課題兩項。共發表六十多篇SCI論文。在林學相關領域有多篇通訊作者SCI論文在Genome Biology、Plant Physiology、 Plant Journal、Bioinformatics和Journal of Integrative Plant Biology等期刊發表。
研究領域 (Research Interests)：
林木表觀遺傳學和生物信息學。長期從事林木表觀遺傳學相關研究，以毛竹、杉木及楊樹為研究對象，結合多組學數據和分子生物學等手段，解析RNA修飾、DNA甲基化、環狀RNA以及選擇性拼接對林木快速生長和開花調控。
研究成果 (Research Achievements)：
首次從單鹼基水平定量解析楊樹次生木質部N6-甲基腺嘌呤（m6A）修飾對楊樹次生生長的調控 (Genome Biology, 2021; Plant physiology, 2022)，並解析毛竹材料非編碼RNA 及編碼基因m6A在毛竹快速生長中的作用 (JIPB, 2020; ; Plant physiology, 2022)。分別從5mC和6mA/4mC 解析DNA甲基化對毛竹開花 (Plant Journal, 2021)和林木次生木質部 (Plant Journal, 2018)的調控。發表環狀RNA和選擇性拼接對毛竹和楊樹生長發育調控（Plant Journal，2017；Cells, 2019; BMC plant biology, 2018; Frontiers in Genetics, 2019；Frontiers in Plant Science, 2021）; 揭示環狀RNA通過R-loop調控宿主基因的選擇性拼接（JIPB，2021）並受轉錄後調控 (Bioinformatics, 2019)；發現m6A和環狀RNA和在毛竹筍快速生長中具有調控作用（Plant and Cell Physiology, 2019）。
發表論文
Papers 2023
- Yandong Jin, Baijie Wang, Mingchuan Bao, Yujie Li, Shengwu Xiao, Yuhua Wang, Jun Zhang, Liangzhen Zhao, Hangxiao Zhang, Yau-Heiu Hsu, Mingjie Li, Lianfeng Gu.(2023). Development of an efficient expression system with large cargo capacity for interrogation of gene function in bamboo based on bamboo mosaic virus. J Integr Plant Biol.,https://doi.org/10.1111/jipb.13468.
- Yongsheng Wang, Huihui Wang, Huiyuan Wang, Ruifan Zhou, Ji Wu, Zekun Zhang, Yandong Jin, Tao Li, Markus V. Kohnen, Xuqing Liu, Wentao Wei, Kai Chen, Yubang Gao, Jiazhi Ding, Hangxiao Zhang, Bo Liu, Chentao Lin, Lianfeng Gu(2023). Multi-omics of Circular RNAs and Their Responses to Hormones in Moso Bamboo (Phyllostachys edulis). Genomics, Proteomics & Bioinformatics. https://doi.org/10.1016/j.gpb.2023.01.007.
- Jiakai Liao, Ban Deng, Qixin Yang, Yu Li, Yuxiang Zhang, Jiajing Cong, Xiaqin Wang, Markus V. Kohnen, Zhong-Jian Liu, Meng-Zhu Lu, Deshu Lin, Lianfeng Gu, Bobin Liu, (2023). Insights into Cryptochrome Modulation of ABA Signaling to Mediate Dormancy Regulation in Marchantia polymorpha. https://doi.org/10.1111/nph.18815
- Tao Li, Huihui Wang, Yaxin Zhang, Huiyuan Wang, Zeyu Zhang, Xuqing Liu, Zekun Zhang, Kai Liu, Deming Yang, Hangxiao Zhang, Lianfeng Gu. (2022). Comprehensive profiling of epigenetic modifications in fast-growing moso bamboo shoots. Plant Physiology. Accept. DOI: kiac525
- Yubang Gao, Xuqing Liu, Yandong Jin, Ji Wu, Shuang Li, Yaxing Li, Binqing Chen, Yaxin Zhang, Linxiao Wei, Wei Li, Ruili Li, Chentao Lin, Anireddy S N Reddy, Pankaj Jaiswal, Lianfeng Gu. (2022). Drought induces epitranscriptome and proteome changes in stem-differentiating xylem of Populus trichocarpa. Plant Physiology, kiac272, https://doi.org/10.1093/plphys/kiac272
- Yushan Zheng, Deming Yang, Jundong Rong, Liguang Chen, Qiang Zhu, Tianyou He, Lingyan Chen, Jing Ye, Lili Fan, Yubang Gao, Hangxiao Zhang, Lianfeng Gu. (2022). Allele-aware chromosome-scale assembly of the allopolyploid genome of hexaploid Ma Bamboo (Dendrocalamus latiflorus Munro) J Integr Plant Biol., DOI: 10.1111/jipb.1321
- Zekun Zhang, Huiyuan Wang, Ji Wu, Yandong Jin, Shengwu Xiao, Tao Li, Xuqinq Liu,Hangxiao Zhang, Zeyu Zhang, Jun Su, Jingzao Liu, Xiaoyan Wang, Yubang Gao, Xiangqing Ma and Lianfeng Gu. (2022). Comprehensive Transcriptome Analysis of Stem-Differentiating Xylem Upon Compression Stress in Cunninghamia Lanceolata. Frontiers in genetics 13.
- Yaxing Zhang, Jun Zhang, Deming Yang, Yandong Jin, Xuqing Liu, Zeyu Zhang, Lianfeng Gu, Hangxiao Zhang, 2022. Genome-wide identification of NAP1 and function analysis in moso bamboo (Phyllostachys edulis). International Journal of Molecular Sciences. 23(12), 6491
- Liufu, Y., Liu, X., Wu, L., Zhang, H., Gao, Y. and Gu, L. (2022). An Analysis Pipeline for Identification of RNA Modification, Alternative Splicing and Polyadenylation Using Third Generation Sequencing. Bio-101: e4433. DOI: 10.21769/BioProtoc.4433.
- Wentao Wei,Huiyuan Wang, Xuqing Liu, Wenjing Kou, Ziqi Liu, Huihui Wang, Yongkang Yang, Liangzhen Zhao, Hangxiao Zhang, Bo Liu, Xiangqing Ma, Lianfeng Gu. 2022. Transcriptome Profiling of Stem-Differentiating Xylem in Response to Abiotic Stresses Based on Hybrid Sequencing in Cunninghamia lanceolata. International Journal of Molecular Sciences,23(22), 13986
- Yongsheng Wang, Huihui Wang, Huiyuan Wang, Ruifan Zhou, Ji Wu, Zekun Zhang, Yandong Jin, Tao Li, Markus V. Kohnen, Xuqing Liu, Wentao Wei, Kai Chen, Yubang Gao, Jiazhi Ding, Hangxiao Zhang, Bo Liu, Chentao Lin, Lianfeng Gu. 2022. Multi-omics of Circular RNAs and Their Responses to Hormones in Moso Bamboo (Phyllostachys edulis) bioRxiv 2022.10.23.513435; doi: https://doi.org/10.1101/2022.10.23.513435
- Zhang, Yu, Yanyun Li, Yuanyuan Zhang, Zeyu Zhang, Deyu Zhang, Xiaonan Wang, Binfan Lai, Dandan Huang, Lianfeng Gu, Yakun Xie, Ying Miao. 2022 "Genome-wide H3K9 acetylation level increases with age-dependent senescence of flag leaf in rice." Journal of Experimental Botany 73, no. 14 (2022): 4696-4715.
- Zhang, Runxuan, Richard Kuo, Max Coulter, Cristiane PG Calixto, Juan Carlos Entizne, Wenbin Guo, Yamile Marquez, Linda Milne, Stefan Riegler, Akihiro Matsui, Maho Tanaka, Sarah Harvey, Yubang Gao, Theresa Wießner-Kroh, Alejandro Paniagua, Martin Crespi, Katherine Denby, Asa ben Hur, Enamul Huq, Michael Jantsch, Artur Jarmolowski, Tino Koester, Sascha Laubinger, Qingshun Quinn Li, Lianfeng Gu, Motoaki Seki, Dorothee Staiger, Ramanjulu Sunkar, Zofia Szweykowska-Kulinska, Shih-Long Tu, Andreas Wachter, Robbie Waugh, Liming Xiong, Xiao-Ning Zhang, Ana Conesa, Anireddy S. N. Reddy, Andrea Barta, Maria Kalyna and John W. S. Brown. 2022 "A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis." Genome biology 23(1): 149.
Papers 2021 (*first-author #corresponding author)
Yubang Gao*, Xuqing Liu*, Bizhi Wu, Huihui Wang, Feihu Xi, Markus V. Kohnen, Anireddy S. N. Reddy, Lianfeng Gu#. (2021) . Quantitative profiling of N6-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing Genome Biology. 22, 22 https://doi.org/10.1186/s13059-020-02241-7
Kai Chen, Kaiqiang Hu, Feihu Xi, Huihui Wang, Markus V. Kohnen, Pengfei Gao, Jiakai Liao, Wentao Wei, Xuqing Liu, Hangxiao Zhang, Lianfeng Gu #. (2021). High-efficient and transient transformation of Moso Bamboo (Phyllostachys edulis) and Ma Bamboo (Dendrocalamus latiflorus Munro). Journal of Plant Biology. https://doi.org/10.1007/s12374-020-09294-y
Zeyu Zhang*, Huihui Wang*, Yongsheng Wang*, Feihu Xi*, Huiyuan Wang, Markus V. Kohnen, Pengfei Gao, Wentao Wei, Kai Chen, Xuqing Liu, Yubang Gao, Ximei Han, Kaiqiang Hu, Hangxiao Zhang, Qiang Zhu, Yushan Zheng, Bo Liu, Ayaz Ahmad, Yau-Heiu Hsu, Steven E. Jacobsen#, Lianfeng Gu#. (2021) . Whole genome characterization of chronological age-associated changes in methylome and circular RNAs in moso bamboo (Phyllostachys edulis) from vegetative to floral growth. Plant Journal. https://doi.org/10.1111/tpj.15174
Xuqing Liu*, Yubang Gao*, Jiakai Liao, Miao Miao, Kai Chen, Feihu Xi, Wentao Wei, Huihui Wang, Yongsheng Wang, Xi Xu, Anireddy S.N. Reddy, and Lianfeng Gu* . (2021). Genome-wide profiling of circular RNAs, alternative splicing, and R-loops in stem-differentiating xylem of Populus trichocarpa. Journal of Integrative Plant Biology, https://doi.org/10.1111/jipb.13081
Xiaqin Wang, Xinyang Yan, Shubin Li, Yun Jing, Lianfeng Gu, Shuangquan Zou, Jin Zhang*, Bobin Liu*, (2021), Genome-wide identification, evolution and expression analysis of the aspartic protease gene family during rapid growth of moso bamboo (Phyllostachys edulis) shoots BMC Genomics25,https://doi.org/10.1186/s12864-020-07290-7
Jian Wang*, Bizhi Wu*, Markus V. Kohnen*, Daqi Lin,Changcai Yang,Xiaowei Wang,Ailing Qiang, Wei Liu,Jianbin Kang, Hua Li,Jing Shen,Tianhao Yao, Jun Su*,Bangyu Li*,and Lianfeng Gu*. (2021). Classification of Rice Yield Using UAV-Based Hyperspectral Imagery and Lodging Feature Plant Phenomics, https://doi.org/10.34133/2021/9765952
Huiyuan Wang, Sheng Liu, Xiufang Dai, Yongkang Yang, Yunjun Luo, Yubang Gao, Xuqing Liu, Wentao Wei, Huihui Wang, Xi Xu, Anireddy S. Reddy, Pankaj Jaiswal, Wei Li, Bo Liu* and Lianfeng Gu* (2021). PSDX: A comprehensive multi-omics association database of Populus trichocarpa with a focus on the secondary growth in response to stresses Front. Plant Sci. | doi: 10.3389/fpls.2021.655565
Guihua Jin, Peng-Fei Ma, Xiaopei Wu, Lianfeng Gu, Manyuan Long#, Chengjun Zhang#, De-Zhu Li# New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos. (2021) Molecular Biology and Evolution, 38(12):5752–5768
Wang, Xu *, Bochen Jiang*, Lianfeng Gu*, Yadi Chen, Manuel Mora, Mulangma Zhu, Eliace Noory, Qin Wang#, and Chentao Lin#. "A photoregulatory mechanism of the circadian clock in Arabidopsis." Nature Plants 7, no. 10 (2021): 1397-1408.
Gu L., Zhang H., Gao J. (2021) Alternative Splicing and Alternative Polyadenylation in Moso Bamboo. In: Gao J. (eds) The Moso Bamboo Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-030-80836-5_7
Papers 2020 (*first-author #corresponding author)
Yongsheng*,Wang Huihui Wang*, Feihu Xi, Huiyuan Wang, Ximei Han, Wentao Wei, Hangxiao Zhang, Qianyue Zhang, Yushan Zheng, Qiang Zhu, Markus V. Kohnen, Anireddy S. N. Reddy, Lianfeng Gu #. (2020) . Profiling of circular RNA N6‐methyladenosine in moso bamboo (Phyllostachys edulis ) using nanopore‐based direct RNA sequencing. Journal of Integrative Plant Biology, 62(12), 1823-1838.
Reddy, A. S., Huang, J., Syed, N. H., Ben-Hur, A., Dong, S., Gu, L. (2020). Decoding co-/post-transcriptional complexities of plant transcriptomes and epitranscriptome using next-generation sequencing technologies. Biochemical Society Transactions, Biochemical Society Transactions, 48(6), 2399-2414.
Shanwen Ye, Gang Chen, Markus V. Kohnen, Wenjia Wang, Changyang Cai, WenSha Ding, Chu Wu, Lianfeng Gu, Yushan Zheng, Xiangqing Ma, Chentao Lin, Qiang Zhu# . Robust CRISPR/Cas9 mediated genome editing and its application in manipulating plant height in the first generation of hexaploid Ma bamboo (Dendrocalamus latiflorus Munro).Plant biotechnology journal, 18(7), 1501.
Jie Huang, Xinyu Lu, Hongwei Wu, Yuchen Xie, Qian Peng, Lianfeng Gu, Juyou Wu, Yuanchao Wang, Anireddy S.N.Reddy, Suomeng Dong#. Phytophthora Effectors Modulate Genome-wide Alternative Splicing of Host mRNAs to Reprogram Plant Immunity.Molecular Plant, 13(10), 1470-1484.
Zhe Zhang, Xuelian Yang, Ling Cheng, Zejun Guo, Huiyuan Wang, Weihuang Wu, Kihye Shin, Jinyao Zhu, Xiaoli Zheng, Jianghu Bian, Yangchen Li, Lianfeng Gu, Qiang Zhu, Zhi-Yong Wang & Wenfei Wang #. Physiological and transcriptomic analyses of brassinosteroid function in moso bamboo (Phyllostachys edulis) seedlings. Planta, 252(2), 1-13.
Papers 2019 (*first-author #corresponding author)
Wang HY*, Wang HH*, Zhang H*, Liu S, Wang Y, Gao Y, Xi F, Zhao L, Liu B, Reddy A, Lin C, Gu L#. (2019). The interplay between microRNA and alternative splicing of linear and circular RNAs in eleven plant species. Bioinformatics, btz038
Wang Y*, Gao Y*, Zhang H*, Wang H, Liu X, Xu X, Zhang Z, Kohnen M, Hu K, Wang H, Xi F, Zhao L, Lin C, Gu L#. (2019). Genome-wide profiling of circular RNAs in the rapidly growing shoots of moso bamboo (Phyllostachys edulis). Plant and Cell Physiology. DOI: 10.1093/pcp/pcz043
Zhao L, Zhang H, Kohnen M, Prasad K, Gu L#, Reddy A#. (2019), Analysis of transcriptome and epitranscriptome in plants using PacBio Iso-Seq and Nanopore-based direct RNA sequencing. Front. Genet. doi: 10.3389/fgene.2019.00253
Wu B, Zhang H, Lin L, Wang H, Gao Y, Zhao L, Chen YP #, Chen R #, Gu L# (2019), A similarity searching system for biological phenotype images using deep convolutional encoder-decoder architecture. Current Bioinformatics, DOI : 10.2174/1574893614666190204150109
Gao Y, Xi F, Zhang H, Liu X, Wang H, Zhao L, Reddy A, Gu L # (2019), Single-molecule real-time (SMRT) isoform sequencing (Iso-Seq) in plants: The status of the bioinformatics tools to unravel the transcriptome complexity, Current Bioinformatics, DOI : 10.2174/1574893614666190204151746
Clark S, Yu F, Gu L, Min X# (2019) Expanding alternative splicing identification by integrating multiple sources of transcription data in tomato , Front. Plant Sci. | doi: 10.3389/fpls.2019.00689
Liu Xu, Gao Y, Zhao L, Cai Y, Wang H, Miao M, Gu L#, Zhang H# (2019) Biogenesis, research methods, and functions of circular RNAs Hereditas. Vol. 41 Issue (6): 469-485
Papers 2018 (*first-author #corresponding author)
Ye G*, Zhang H*, Chen B, Nie S, Liu H, Gao W, Wang H, Gao Y, Gu L#.De novo genome assembly of the stress tolerant forest species Casuarina equisetifolia provides insight into secondary growth, (2018), Plant Journal. https://doi.org/10.1111/tpj.14159.
Zhang H*, Wang H*, Zhu Q*, Gao Y, Wang H, Zhao L, Wang Y, Xi F, Wang W, Yang Y, Lin C, Gu L# (2018),Transcriptome characterization of moso bamboo (Phyllostachys edulis) seedlings in response to exogenous gibberellin applications, BMC plant biology,2018,18:125
Wang Q, Zuo Z, Wang X, Liu Q, Gu L, Oka Y, Lin C (2018),Beyond the photocycle – how cryptochromes regulate photoresponses in plants?, Current Option in Plant Biology, 45, 120-126.
Wang, G., Sun, P., Gong, Z., Gu, L., Lou, Y., Fang, W., Zhang, L., Su, L., Yang, T., Wang, B. and Zhou, J., 2018.Srk1 kinase, a SR protein‐specific kinase, is important for sexual reproduction, plant infection and pre‐mRNA processing in Fusarium graminearum.Environmental microbiology.
Liu B., Zhang J., Yang Z., Matsui A., Li S., Yan X., Kohnena M., Gu L., Prasad K., Tuskan G., Lu M.,# Oka Y.# (2018).PtWOX11 acts as master regulator conducting the expression of key transcription factors to induce de novo shoot organogenesis in poplar.Plant Molecular Biology. (2018): 1-18.
Papers 2017 (*first-author #corresponding author)
Wang T*, Wang H*, Cai D*, Gao Y, Zhang H, Wang Y, Lin C, Ma L#, Gu L#, (2017), Comprehensive profiling of rhizome-associated alternative splicing and alternative polyadenylation in moso bamboo (Phyllostachys edulis). The Plant Journal.
Wang W*, Gu L*, Ye S, Zhang H, Cai C, Xiang M, Gao Y, Wang Q, Lin C, Zhu Q#, (2017), Genome-wide analysis and transcriptomic profiling of the auxin biosynthesis, transport and signaling family genes in moso bamboo (Phyllostachys heterocycla). BMC Genomics. 2017 Nov 13;18(1):870. doi: 10.1186/s12864-017-4250-0.
Wang K*, Jiao Z*, Xu M*, Wang Y, Li R, Cui X, Gu L#, Zhang S#. (2017), Landscape and Fruit Developmental Regulation of Alternative Splicing in Tomato by Genome-wide Analysis Horticultural Plant Journal. supplemental website
Wang, X., Wang, Q., Han, Y.J., Liu, Q., Gu, L., Yang, Z., Su, J., Liu, B., Zuo, Z., and He, W., Wang,J., Liu, B., Matsui, M., Kim,J., Oka, Y., Lin,C (2017). A CRY-BIC negative feedback circuitry regulating blue light sensitivity of Arabidopsis. The Plant Journal.
Hansheng Zhao*, Shancen Zhao*, International Network for Bamboo and Rattan, Benhua Fei, Huan Liu, Huanming Yang, Honghai Dai, Dan Wang, Wei Jin, Feng Tang, Qiang Gao, Hang Xun, Yuwei Wang, Lianghua Qi, Xianghua Yue, Shuyan Lin, Lianfeng Gu, Lubin Li, Tiansheng Zhu, Qiang Wei, Zhen Su, Tarmeze Bin Wan Ariffin Wan, Daniel A. Ofori, George Mbeva Muthike, Yigardu Mulatu Mengesha, Roberto Magno de Castro e Silva, Antonio Ludovico Beraldo, Zhimin Gao#, Xin Liu#, Zehui Jiang#; Announcing the Genome Atlas of Bamboo and Rattan (GABR) project: promoting research in evolution and in economically and ecologically beneficial plants. Gigascience 2017 gix046. doi: 10.1093/gigascience/gix046
Papers 2016(*first-author †corresponding author)
Zhang, H., Lin, C. and Gu, L†. (2016), Light Regulation of Alternative Pre-mRNA Splicing in Plants. Photochem Photobiol. Photochem Photobiol. doi:10.1111/php.12680(†corresponding).
Wang Q*, Zuo Z*, Wang X*, Gu L, Yoshizumi T,Yang,Z H,Liu Q,Liu W,Han Y,Liu B, Wohlschlegel J A, Matsui M, Oka Y and Lin C.(2016) Photoactivation and inactivation mechanisms of Arabidopsis cryptochrome2. Science.Vol. 354, Issue 6310, pp. 343-347.DOI: 10.1126/science.aaf9030
Yan H, Zhang H, Wang Q, Jian H, Qiu X, Baudino S, Just J, Raymond O, Gu L, Jihua W, Bendahmane M and Tang K (2016). The Rosa chinensis cv. Viridiflora phyllody phenotype is associated with misexpression of flower organ identity genes. Front. Plant Sci. 7:996. doi: 10.3389/fpls.2016.00996
Li S, Zhang G, Zhang X, Yuan J, Deng C, Gu L†, Gao W†. DPTEdb, an integrative database of transposable elements in dioecious plants. Database 2016: baw078 doi:10.1093/database/baw078 (†co-corresponding).
Li C, Gu L, Gao L, Chen C, Wei C, Qiu Q, Chien C, Wang S, Jiang L, Chen C, Yang S, Nguyen V, Snyder M, Burlingame A, Kohalmi S, Huang S, Cao X, Wang Z, Wu K, Chen X, Cui Y. Concerted genomic targeting of histone H3 lysine 27 demethylase REF6 and chromatin-remodeling ATPase BRM in Arabidopsis. Nature genetics. (2016). doi:10.1038/ng.3555
Cui X*, Lu F*, Qiu Q*, Zhou B*, Gu L, Zhang S, Kang Y, Cui X, Ma X, Yao Q, Ma J, Zhang X, Cao X. REF6 recognizes a specific DNA sequence to demethylate H3K27me3 and regulate organ boundary formation in Arabidopsis. Nature genetics. (2016). doi:10.1038/ng.3556
Deng X*, Lu T*, Wang L*, Gu L, Sun J, Kong X, Liu C, Cao X. Recruitment of the NineTeen Complex to the activated spliceosome requires AtPRMT5.PNAS 2016, doi:10.1073/pnas.1522458113
Zhang S, Xu M, Qiu Z, Wang K, Du Y, Gu L†, Cui X†. Spatiotemporal transcriptome provides insights into early fruit development of Solanum lycopersicum, Sci. Rep. 6, 23173; doi: 10.1038/srep23173 (2016). (†co-corresponding).
Wu, Z*, Zhu D*, Lin X*, Miao L*, Gu L, Deng X, Yang Q, Sun K, Zhu D, Cao X, TSUGE T, Dean C, Aoyama T, Gu H, Qu L. RNA-binding proteins At RZ-1B and At RZ-1C play a critical role in regulation of pre-mRNA splicing and gene expression during Arabidopsis development. The Plant Cell (2016): TPC2015-00949.
Papers before 2016
Zhang Y.,* Gu, L.,* Hou, Y.*, Wang L., Deng, X., Hang, R.,Chen,D., Zhang,X., Zhang, Y., Liu, C., and Cao, X. 2015 Integrative genome-wide analysis reveals HLP1, a novel RNA-binding protein， regulates plant flowering by targeted alternative polyadenylation .Cell Research. 2015 Jun 23. doi: 10.1038/cr.2015.77 PMID: 26099751
Wei L,* Gu L,* Song X*, Cui X, Lu Z, Zhou M, Wang L, Hu F, Zhai J, Meyer B, Cao X. (2014) Dicer-like 3 produces transposable element-associated 24-nt siRNAs that control agricultural traits in rice. Proc Natl Acad Sci U S A 111: 3877-3882.
Deng, X.,* Gu, L.,* Liu, C.*, Lu, T*., Lu, F., Lu, Z., Cui, P., Pei, Y., Wang, B., Hu, S., and Cao, X. (2010). Arginine methylation mediated by the Arabidopsis homolog of PRMT5 is essential for proper pre-mRNA splicing. Proc Natl Acad Sci U S A 107, 19114-19119.
Zhou, M.*, Gu, L.*, Li, P., Song, X., Wei, L., Chen, Z. and Cao, X. (2010) Degradome sequencing reveals endogenous small RNA targets in rice (Oryza sativa L. ssp. indica). Front. Biol., 5, 67-90.
Wu, B., Suo, F., Lei, W., and Gu, L †. (2014). Comprehensive Analysis of Alternative Splicing in Digitalis purpurea by Strand-Specific RNA-Seq. PLoS One 9, e106001.
Gu, L., and Guo, R. (2007). Genome-wide detection and analysis of alternative splicing for nucleotide binding site-leucine -rich repeats sequences in rice. J Genet Genomics 34, 247-257.
Wang, L., Song, X., Gu, L., Li, X., Cao, S., Chu, C., Cui, X., Chen, X., and Cao, X. (2013). NOT2 proteins promote polymerase II-dependent transcription and interact with multiple MicroRNA biogenesis factors in Arabidopsis. Plant Cell 25, 715-727.
Cui X., Jin P., Cui X., Gu, L., Lu Z., Xue Y., Wei L., Qi J., Song X., Luo M., Gynheung An, Cao X. (2013) Control of Transposon Activity by a Histone H3K4 Demethylase in Rice. Proc Natl Acad Sci U S A. 110(5):1953-1958.
Zhang L., Cheng Z., Qin R., Qiu Y., Wang J., Cui X., Gu, L., Zhang X., Guo X., Wang D., Jiang L., Wu C., Wang H., Cao X., Wan J. (2012). Identification and Characterization of an Epi-1 allele of OsFIE1 Reveals a Regulatory Linkage between two Epigenetic Marks in Rice. Plant Cell 24, 4407-4421.
Zhou H., Zhou M., Yang Y., Li J., Zhu L., Jiang D., Dong J., Liu Q., Gu L., Zhou L., … Cao X., Zhuang C. (2014). RNAase Zs1 processes UBL40 mRNA and controls thermo-sensitive genic male sterility in rice. NATURE COMMUNICATIONS. doi:10.1038/ncomms5884
人物獲獎
2017年11月，獲得第十四屆林業青年科技獎。
