周明兵，男，1975年10月生，浙江農林大學教授，浙江省151人才工程第三層次，浙江省中青年學科帶頭人。
基本介紹
研究方向,學習與工作經歷,教學工作,科研項目,論文與專著,論文,專著,專利,
研究方向
竹子生長發育表觀遺傳學，竹子快速生長機理
學習與工作經歷
2000年9月-2003年7月：貴州大學攻讀碩士學位
2006年9月-2010年11月：上海交通大學攻讀博士學位
2009年9月-2010年3月：德國亥姆霍茲國家研究中心訪問學者
2003年7月起： 浙江農林大學教師
教學工作
研究生課程：蛋白質工程，生物信息學
本科生課程： 細胞與分子生物學，細胞生物學，分子生物學
科研項目
1.毛竹LTR反轉錄轉座子回響環境變化的分子機理，國家自然科學基金項目，2019.1.1-2022.12.31，60萬元，主持（1/7 ）
2.毛竹MLE（mariner-like element）轉座酶催化機理研究，浙江省自然科學基金重點項目，2019.1.1-2022.12.31，主持（1/6），35萬元
3.毛竹LTR反轉錄轉座子轉座調控機理及對宿主生物多樣性的影響，國家自然科學基金項目，2015.1.1-2018.12.31，87萬元，主持（1/8 ）
4.毛竹活性MITE的分離及與宿主基因表達調控網路互作機制解析，國家自然科學基金項目，2013.1.1-2016.12.31, 80萬元，主持（1/8）
5.竹亞科LTR反轉錄轉座子的分布和增殖模式及對宿主基因組進化的影響，浙江省傑出青年項目，2012.1.1-2016.12.31，30萬元，主持（1/1）
6.由居間分生組織調控的毛竹快速拔節生長的分子機理研究,國家自然科學基金項目，2016.1.1-2018.12.31，24萬元，2/6
7.超活性mariner-like轉座子的構建及在基因標籤技術套用的探討，國家自然科學基金項目，2010.1.1-2013.12.31，31萬元，主持（1/8）。
論文與專著
論文
1.Ramakrishnan M, Yrjälä K, Sharma A, Satheesh V, Cho J, Zhou MB*. (2020). Genetics and genomics of moso bamboo (Phyllostachys edulis): current status, future challenges and biotechnological opportunities towards a sustainable bamboo industry. Food and Energy Security, 2020, 9(4):e229.
2.Tao GY, Ramakrishnan M, Vinod KK, Yrjälä K, Satheesh V, Cho J, Fu Y, Zhou MB*. (2020). Multi-omics analysis reveals cellular pathways for rapid growth of moso bamboo. Tree Physiology. 40(11): 1487–1508.
3.Ramakrishnan M, Zhou M*, Pan C, Hänninen H, Yrjälä K, Vinod KK, Tang D. Affinities of Terminal Inverted Repeats to DNA Binding Domain of Transposase Affect the Transposition Activity of Bamboo Ppmar2 Mariner-Like Element. Int J Mol Sci. 2019, 20(15), 3692.
4.Li S, Ramakrishnan M, Vinod K K, Kalendar R, Yrjälä K, & Zhou M*. (2020). Development and deployment of high-throughput retrotransposon-based markers reveal genetic diversity and population structure of Asian bamboo. Forests, 11(1), 31.
5.Ramakrishnan M, Zhou MB*, Pan CF, Hänninen H, Tang DQ, Vinod KK. Nuclear export signal (NES) of transposases affects the transposition activity of mariner-like elements Ppmar1 and Ppmar2 of moso bamboo. Mob DNA. 2019, 10:35. doi: 10.1186/s13100-019-0179-y. eCollection 2019.
6.Zhou M*, Wu J, Ramakrishnan M, Meng X, Vinod K. Prospects for the study of genetic variation among Moso bamboo wild-type and variants through genome resequencing. Trees, 2019, 33(2):371–381
7.Zhou M*, Zhou Q, Hänninen H. The distribution of transposable elements (TEs) in the promoter regions of moso bamboo genes and its influence on downstream genes. Trees, 2018, 2(2):525–537.
8.Zhou M*, Zhu Y, Bai Y, Hänninen K, Meng X. Transcriptionally active LTR retroelement-related sequences and their relationship with small RNA in moso bamboo (Phyllostachys edulis). Molecular Breeding, 2017, 37:132.
9.Zhou M, Chen A, Zhou Q, Tang D, Hänninen K. A moso bamboo (Phyllostachys edulis) miniature inverted-repeat transposable element (MITE): the possible role of a suppressor. Tree Genetics & Genomes (2017) 13: 129.
10.Zhou M, Hu H, Liu Z, Tang D. Two active bamboo mariner-like transposable elements (Ppmar1 and Ppmar2) identified as the transposon-based genetic tools for mutagenesis. 2016, Molecular Breeding, 36:163.
11.Zhou M*, Liang L, Hänninen K. A transposition-active Phyllostachys edulis LTR retrotransposon. Journal of Plant Research, 2018, 131:203–210.
12.Zhou MB, Hu H, Miskey C, Lazarow K, Ivics Z, Kunze R, Yang G, Izsvák Z, Tang DQ. Transposition of the bamboo Mariner-like element Ppmar1 in yeast. Mol Phylogenet Evol, 2017, 109: 367-374
13.Zhou M, Hu B, Zhu Y. Genome-wide characterization and evolution analysis of long terminal repeat retroelements in moso bamboo (Phyllostachys edulis). Tree Genetics & Genomes, 2017, 13: 43. doi:10.1007/s11295-017-1114-3
14.Zhou M*, Xu C, Shen L, Xiang W, Tang D. Evolution of genome sizes in Chinese Bambusoideae (Poaceae) in relation to karyotype. Trees, 2017, 31(1): 41–48
15.Jiang KY, Zhou, MB*, Yang HY, Fang W. Cloning and functional characterization of PjCAO gene involved in chlorophyll b biosynthesis in Pseudosasa japonica cv. Akebonosuji. Trees, 2016, 30: 1303–1314
16.Zhou MB*, Zheng Y, Liu ZG, Xia XW, Ding-Qin Tang DQ, Fu Y, Chen M. Endo-1,4-b-glucanase gene involved into the rapid elongation of Phyllostachys heterocycla var. pubescens, Trees, 2016, 30: 1259–1274
17.Zhou M*, Tao G, Pi P, Zhu Y, Bai Y, Meng X. Genome-wide characterization and evolution analysis of miniature inverted-repeat transposable elements (MITEs) in moso bamboo (Phyllostachys heterocycla). Planta, 2016, 244:775–787.
18.Jiang KY, Zhou MB*. Cloning and functional characterization of PjPORB, a member of the POR gene family in Pseudosasa japonica cv. Akebonosuji. Plant Growth Regulation, 2016, 79(1): 95–106
19.Xia XW, Gui RY, Yang HY, Fu Y, Fang W, Zhou MB*. Identification of genes involved in color variation of bamboo culms by suppression subtractive hybridization. Plant Physiology and Biochemistry. 2015, 97: 156-164
20.Zhou MB*, An MM, Xia XW, Yang HY, Cheng MM, Wang KL, Fang W. Sequencing and phylogenetic analysis of the chloroplast genome of Pseudosasa japonica f. Akebonosuji. Biochemical Systematics and Ecology, 2016, 69:41-50
21.Yang HY, Xia XW, Fang W, Fu Y, An MM, Zhou MB*. Identification of genes involved in spontaneous leaf color variation in Pseudosasa japonica. Genet. Mol.Res., 2015, 14 (4): 11827-11840
22.Zhou MB, Zhong H, Hu JL, Tang DQ. Ppmar1 and Ppmar2: the first two complete and intact full-length mariner-like elements isolated in Phyllostachys edulis. Acta Botanica Gallica: Botany Letters, 2015, 162(2):127-137
23.Zhou MB, Zhang Y, Tang DQ. Characterization and Primary Functional Analysis of BvCIGR, a Member of the GRAS Gene Family in Bambusa ventricosa. Bot Rev, 2011, 77(3): 233-242.
24.Zhou MB, Zhong H, Tang DQ. Isolation and characterization of seventy-nine full-length mariner-like transposases in the Bambusoideae subfamily. J Plant Res, 2011, 124: 607–617
25.Zhou MB, Yang P, Gao PJ, Tang DQ. Identification of differentially expressed sequence tags in rapidly elongating phyllostachys pubescens internodes by suppressive subtractive hybridization. Plant Molecular Biology Reporter, 2011, 29: 224–231
26.Zhou MB, Lu JJ, Zhong H, Liu XM, Tang DQ. Distribution and diversity of PIF-like transposable elements in the Bambusoideae subfamily. Plant Sci, 2010, 179: 257–266.
27.Zhou MB, Lu JJ, Zhong H, Tang KX, Tang DQ. Distribution and polymorphism of mariner-like elements in the Bambusoideae subfamily. Plant Syst Evol, 2010, 289: 1–11
28.Zhou MB, Zhong H, Zhang QH, Tang KX, Tang DQ. Diversity and evolution of Ty1-copia retroelements in representative tribes of Bambusoideae subfamily. Genetica, 2010, 138: 861–868
29.Zhong H, Zhou MB**, Xu CM, Tang DQ. Diversity and evolution of Pong-like elements in Bambusoideae subfamily. Biochem Syst Ecol, 2010, 38: 750–758
30.Chen WW, Qin QP, Zheng YP, Wang C, Wang S, Zhou MB, Zhang C, Cui YY. Overexpression of Doritaenopsis Hybrid EARLY FLOWERING 4-like4 Gene, DhEFL4, Postpones Flowering in Transgenic Arabidopsis. 2016, Plant Molecular Biology Reporter, 34(1):103–117
31.Chen W, Qin Q, Zhang C, Zheng Y, Wang C, Zhou MB, Cui Y. DhEFL2, 3 and 4, the three EARLY FLOWERING4-like genes in a Doritaenopsis hybrid regulate floral transition. Plant Cell Rep. 2015, 34(12): 2027-2041.
32.Sun XS, Qin QP,Zhang J, Zhang C, Zhou MB, Paek KY, Cui YY. Isolation and characterization of the FVE gene of a Doritaenopsis hybrid involved in the regulation of flowering. Plant Growth Regulation, 2012, 68(1): 77-78
33.Sun XS, Qin QP,Zhang J, Zhang C, Zhou MB, Paek KY, Cui YY.Cloning and characterization of a Doritaenopsis hybrid PRP39 gene involved in flowering time. Plant Cell, Tissue and Organ Culture (PCTOC), 2012, 110(3): 347-357
34.Qin QP, Kaas Q, Zhang C, Zhou LP, Luo XY, Zhou MB, Sun XM, Zhang LL, Paek KY, Cui YY. The Cold Awakening of Doritaenopsis ‘Tinny Tender’ Orchid Flowers: The Role of Leaves in Cold-induced Bud Dormancy Release. J Plant Growth Regul, 2012, 31(2): 139-155
35.Luo XY, Zhang C, Sun XM, Qin QP, Zhou MB, Paek KY, Cui YY. Isolation and characterization of a Doritaenopsis hybrid GIGANTEA gene, which possibly involved in inflorescence initiation at low temperatures. Kor. J. Hort. Sci. Technol., 2011, 29 (2): 135-143
36.Dong WJ, Wu MD, Lin Y, Zhou MB, Tang DQ. Evaluation of 15 caespitose bamboo EST-SSR markers for cross-species/genera transferability and ability to identify interspecies hybrids. Plant Breeding, 2011, 130: 596–600
37.Tang DQ, Lu JJ, Fang W, Zhang S, Zhou MB. Development, characterization and utilization of GenBank microsatellite markers in Phyllostachys pubescens and related species. Mol Breed, 2010, 25: 299-311
38.Lin Y, Lu JJ, Wu MD, Zhou MB, Fang W, Ide Y, Tang DQ. Identification, cross-taxon transferability and application of full-length cDNA SSR markers in Phyllostachys pubescens. Springerplus. 2014, 3:486.
39.劉秀麗，湯定欽，周明兵*.酵母Ty1和Ty3轉座調控機制研究進展.微生物學雜誌, 2020, 40(2):78-86
40.季航,周明兵*,蔣政勤,鄭 浩,徐芷馨.毛竹LTＲ 反轉錄轉座子PHＲE8的鑑定與轉錄模式分析.核農學報2020，34( 4) : 0705-0713
41.楊雅倩,傅鷹.周明兵*.毛竹細胞分裂素相關基因鑑定及在筍中表達特徵分析.林業科學, 2019, 55(12):61-73
42.蔣政勤,周明兵*,鄭浩,季航,徐芷馨.毛竹Phyllostachys edulis retrotransposon 7（PHRE7）轉座子的克隆與鑑定. 2019,浙江農林大學學報, 36(5): 917-927
43.葉家其,張毓婷,傅鷹,周明兵*,湯定欽.毛竹莖稈伸長過程中赤黴素生物合成、降解和信號轉導關鍵基因的鑑定及表達分析.生物工程學報, 2019, 35(6): 1−20
44.潘飛翔,湯定欽,周明兵*.一個毛竹LTR反轉錄轉座子結構鑑定及表達模式分析.生物工程學報, 2019, 35(3): 445-457
45.張贊一，周明兵*，湯定欽.毛竹LTR反轉錄轉座子PHRE6的克隆與轉錄活性分析.中國細胞生物學學報，2018，40(9): 1466-1478.
46.胡冰傑，周明兵*.植物中活性MITEs轉座子研究進展[J].生物工程學報, 2018, 34(2): 204−215.
47.王凱利,傅鷹,周明兵*.毛竹SQUAMOSA啟動子結合蛋白SBP家族基因的鑑定及表達模式分析.林業科學, 2017, 53(12): 50-61.
48.陶貴耘，傅鷹，周明兵*.竹類植物快速生長的機理研究進展.農業生物技術學報, 2018, 26(5): 871-887
49.劉靜，湯定欽，傅鷹，周明兵*.模式植物側芽和竹子筍芽分化發育的研究進展. 2017, 25 (5): 788-804
50.陳昂，周明兵*，湯定欽，137Cs-r輻照及５-氮雜胞苷處理毛竹種子對其實生苗甲基化水平的影響.核農學報, 2017, 31(2): 218-224.
51.梁琳琳，周明兵*.植物活性長末端重複序列反轉錄轉座子研究進展.生物工程學報, 2016, 32(4): 409-429
52.潘春芳,湯定欽,周明兵*. ITm活性轉座子及其結構特徵分析.中國細胞生物學學報, 2016, 38(1):110-122
53.安苗苗，劉 靜，酈 元，周明兵*.花葉矢竹轉錄組中的轉座子表達分析.浙江農林大學學報. 2016, 33(6): 935-943
54.胡慧，周明兵*，楊萍，湯定欽.毛竹微型顛倒重複序列轉座子PhTourist1的克隆與分析.林業科學，2015，51(5)：127-134
55.許冰清，安苗苗，姜可以，徐麗麗，楊海芸，周明兵*.花葉矢竹葉綠體psbD基因的克隆與功能分析.浙江農林大學學報，2015，32(4)：557-565
56.徐麗麗，安苗苗，徐冰清，姜可以，徐冰清，楊海芸，周明兵*.花葉矢竹psaA基因克隆及功能分析.竹子研究彙刊, 2015, 34(1): 41-48
57.楊海芸，何安國，姜可以，李朝娜，周明兵*. 137Cs-γ射線輻照矢竹類組培苗生物學效應.核農學報, 2014, 28(11)：1941-1949
58.周倩倩,周明兵*.轉座酶的人工改造與修飾.生物工程學報, 2014, 30(10): 1504−1514
59.林翩翩,白有煌,周明兵.毛竹細胞色素P450的基因組學分析.植物生理學報，2014, 50 (9): 1387-1400
60.姜可以，周明兵*.竹子分子生物學研究進展.熱帶亞熱帶植物學報，2014, 22(6)：632-642.
61.夏湘婉，黃雲峰，周明兵*.毛竹生物資源多樣性.竹子研究彙刊, 2014, 33(4): 6-15
62.周敏，湯定欽，周明兵*.一個毛竹典型LTR轉座子的克隆、鑑定及進化分析.竹子研究彙刊, 2014, 33(3):1-10
63.鄭麗娜，周明兵*.毛竹快速拔節過程節間組織cDNA文庫的構建與分析.福建林業科技, 2012, 39（3）：19-23
64.周明兵，王曉飛，湯定欽.野生型和變異型小佛肚竹cDNA文庫的構建.竹子彙刊, 2005, 24(3): 5-8.
65.賈芳信，周明兵，陳榮，楊海芸，高培軍，徐川梅。4種竹子的核型及其基因組大小。林業科學，2016，52(9)：57-66.
66.沈利芬,項偉波,范彩廷,金鵬,周明兵,徐川梅.楊梅開花生物學特性.浙江農林大學學報, 2015, 32(2): 278-284
67.楊萍,楊潮鋒,周明兵.重點實驗室開放共享機制的探索與實踐.實驗室科學, 2015, 18(2): 141-143
68.林新春,湯定欽,郭小勤,周明兵,楊萍,張智俊.分子生物學合作式教學改革與實踐.課程教育研究, 2013, (1): 101-102
69.葛夢，喻衛武，周明兵，王同標，楊萍. 浙江楊梅品種遺傳差異的SRAP分析. 浙江林業科技, 2012, 32(5):37-41
70.王月圓，劉向敏，周明兵，湯定欽.小佛肚竹生氰糖苷合成關鍵酶CYP79家族同源基因的克隆和鑑定.浙江農林大學學報. 2012, 29(4):510-515
71.張遲，周廬萍，羅小燕，孫小明，秦巧平，周明兵，崔永一.低溫對朵麗蝶蘭成花過程中碳水化合物及糖轉運蛋白基因表達的影響.中國農業科學, 2011, 44(8):1670-1677
72.劉政捷,林源,周明兵,湯定欽.套用微衛星分子標記估算毛竹的異交率.林業科學，2014, 50 (8): 76-81
73.鐘浩，周明兵，白有煌，湯定欽.毛竹Stowaway-like MITEs轉座子的富集與分析.林業科學，2010, 4(46): 37-42.
74.梁銀燕，周明兵，湯定欽.毛竹簡易基因組文庫的快速構建.世界竹藤通訊，2008, 6(2): 14-1.
專著
75.Ramakrishnan M, Yrjälä K, Satheesh V, and Zhou MB. (2020). Bamboo transposon research: current status and perspectives. Plant Transposable Elements: Methods and Protocols. Edited by. Jungnam Cho. (Springer publication)
76.Tang DQ, Zhou MB. (2018) The Distribution, Evolution, Structural Characteristics, and Functional Analysis of the Mariner-Like Elements in Bamboo. In: Kumar A., Ogita S., Yau YY. (eds) Biofuels: Greenhouse Gas Mitigation and Global Warming. Springer, New Delhi
77.Tang DQ, Zhou MB. Repetitive DNA sequences in phyllostachys pubescens genome, 2011, Chapter 1. @ Bioinformatics: genome bioinformatics and computational biology, editor, Renu Tuteja, United States, ISBN: 9781621009139 (hardcover)
78.周明兵 主編，林木植物生理生化和分子生物學實驗指南，陝西人民教育出版社，2015年6月，ISBN: 9787545035537，教材。
專利
79.一種具有高催化活性的Ppmarl轉座酶D332S突變體及其套用.周明兵,湯定欽. 發明專利, ZL201710042523.6, 2020-09-11
80.一種具有高催化活性的Ppmarl轉座酶V376A突變體及其套用.周明兵,湯定欽. 發明專利, ZL201710042731.6, 2020-09-11
81.一種具有高催化活性的Ppmarl轉座酶C296I突變體及其套用,周明兵,湯定欽.發明專利, ZL201710042721.2, 2020-09-11
82.一種具有高催化活性的Ppmarl轉座酶S171A突變體及其套用,周明兵,湯定欽.發明專利, ZL201710042725.0, 2020-08-28
83.一種具有高催化活性的Ppmarl轉座酶F302Q突變體及其套用,周明兵,湯定欽.發明專利, ZL201710042522.1, 2020-08-20
